Data

Attention: A Beta Version of the TARDIS Portal is Online!

We are developing ways of automatically indexing datasets across institutional repositories, so that this page will provide searching, browsing, and deposition tools.

In the meantime we are providing manual links to datasets.


Title The structure of Mycobacterial bacterioferritin
Citation The dataset contains 127 images collected at BM14 (ESRF Grenoble, France). Resolution of the final dataset is 2.71 A
Collection size 2.25 GB

No. of Datasets 1
URL http://arrow.monash.edu.au/hdl/1959.1/6695
PDB 3B3H
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Title Crystal structure of a lysin
Citation Porter CJ, Schuch R, Pelzek AJ, Buckle AM, McGowan S, Wilce MC, Rossjohn J, Russell R, Nelson D, Fischetti VA, Whisstock JC. (2006) The 1.6 A crystal structure of the catalytic domain of PlyB, a bacteriophage lysin active against Bacillus anthracis.
Collection size 10.96 GB
No. of Datasets 1
URL http://arrow.monash.edu.au/hdl/1959.1/6696
PDB 2NW0
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Title Transthyretin-like protein from Salmonella dublin
Citation Hennebry SC, Law RH, Richardson SJ, Buckle AM, Whisstock JC. (2006) The crystal structure of the transthyretin-like protein from Salmonella dublin, a prokaryote 5-hydroxyisourate hydrolase.
Collection size 3.04 GB
No. of Datasets 1
URL http://arrow.monash.edu.au/hdl/1959.1/6697
PDB 2GPZ
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Title Structure of a MACPF/Perforin-like protein.
Citation Rosado et. al. (2007) A common fold mediates vertebrate defense and bacterial attack. Science. In Press
Collection size 36.1 GB
No. of Datasets 5
URL http://arrow.monash.edu.au/hdl/1959.1/5863
PDB 2QP2
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XML Schema

Here's the current XML schema for how we're describing datasets.

A "Dataset" is defined as being a series of images, from one data capture, on one protein.

Datasets.xsd

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DatasetsExample.XML

Here's an example of a datasets xml file, produced by DatasetPackager on 5 dataset packages and combined with ProjectDepositor

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